Machine learning-based typing of Salmonella enterica O-serogroups by the Fourier-Transform Infrared (FTIR) Spectroscopy-based IR Biotyper system.

Miriam Cordovana; Norman Mauder; Olivier Join-Lambert; François Gravey; Simon LeHello; Michel Auzou; Monica Pitti; Simona Zoppi; Michael Buhl; Jörg Steinmann; Hagen Frickmann; Denise Dekker; Yumiko Funashima; Zenzo Nagasawa; József Soki; László Orosz; Alida C Veloo; Ulrik S Justesen; Hanne M Holt; Andrea Liberatore; Simone Ambretti; Stefano Pongolini; Laura Soliani; Andreas Wille; Sandra Rojak; Ralf Matthias Hagen; Jürgen May; A B Pranada; Markus Kostrzewa

doi:10.1016/j.mimet.2022.106564

Machine learning-based typing of Salmonella enterica O-serogroups by the Fourier-Transform Infrared (FTIR) Spectroscopy-based IR Biotyper system.

Miriam Cordovana, Norman Mauder, Olivier Join-Lambert, François Gravey, Simon LeHello, Michel Auzou, Monica Pitti, Simona Zoppi, Michael Buhl (Co-author), Jörg Steinmann (Co-author), Hagen Frickmann, Denise Dekker, Yumiko Funashima, Zenzo Nagasawa, József Soki, László Orosz, Alida C Veloo, Ulrik S Justesen, Hanne M Holt, Andrea LiberatoreSimone Ambretti, Stefano Pongolini, Laura Soliani, Andreas Wille, Sandra Rojak, Ralf Matthias Hagen, Jürgen May, A B Pranada, Markus Kostrzewa

Institute of Clinical Microbiology, Infectious Diseases and Infection Control

Research output: Contribution to journal › Original Article › peer-review

13 Citations (Web of Science)

Original language	English
Pages (from-to)	106564
Journal	JOURNAL OF MICROBIOLOGICAL METHODS
Volume	201
DOIs	https://doi.org/10.1016/j.mimet.2022.106564
Publication status	Published - 2022

Keywords

DIFFERENTIATION
IDENTIFICATION
CLASSIFICATION
BACTERIA
SEROTYPE

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10.1016/j.mimet.2022.106564

Cite this

Cordovana, M., Mauder, N., Join-Lambert, O., Gravey, F., LeHello, S., Auzou, M., Pitti, M., Zoppi, S., Buhl, M., Steinmann, J., Frickmann, H., Dekker, D., Funashima, Y., Nagasawa, Z., Soki, J., Orosz, L., Veloo, A. C., Justesen, U. S., Holt, H. M., ... Kostrzewa, M. (2022). Machine learning-based typing of Salmonella enterica O-serogroups by the Fourier-Transform Infrared (FTIR) Spectroscopy-based IR Biotyper system. JOURNAL OF MICROBIOLOGICAL METHODS, 201, 106564. https://doi.org/10.1016/j.mimet.2022.106564

@article{e1dafeb4e24c4aa6baaa757983d0daab,

title = "Machine learning-based typing of Salmonella enterica O-serogroups by the Fourier-Transform Infrared (FTIR) Spectroscopy-based IR Biotyper system.",

keywords = "DIFFERENTIATION, IDENTIFICATION, CLASSIFICATION, BACTERIA, SEROTYPE",

author = "Miriam Cordovana and Norman Mauder and Olivier Join-Lambert and Fran{\c c}ois Gravey and Simon LeHello and Michel Auzou and Monica Pitti and Simona Zoppi and Michael Buhl and J{\"o}rg Steinmann and Hagen Frickmann and Denise Dekker and Yumiko Funashima and Zenzo Nagasawa and J{\'o}zsef Soki and L{\'a}szl{\'o} Orosz and Veloo, {Alida C} and Justesen, {Ulrik S} and Holt, {Hanne M} and Andrea Liberatore and Simone Ambretti and Stefano Pongolini and Laura Soliani and Andreas Wille and Sandra Rojak and Hagen, {Ralf Matthias} and J{\"u}rgen May and Pranada, {A B} and Markus Kostrzewa",

note = "Buhl, Steinmann: Institute of Clinical Hygiene, Medical Microbiology and Infectiology, Paracelsus Medical University, Nuremberg, Germany",

year = "2022",

doi = "10.1016/j.mimet.2022.106564",

language = "English",

volume = "201",

pages = "106564",

journal = "JOURNAL OF MICROBIOLOGICAL METHODS",

issn = "0167-7012",

}

Cordovana, M, Mauder, N, Join-Lambert, O, Gravey, F, LeHello, S, Auzou, M, Pitti, M, Zoppi, S, Buhl, M , Steinmann, J, Frickmann, H, Dekker, D, Funashima, Y, Nagasawa, Z, Soki, J, Orosz, L, Veloo, AC, Justesen, US, Holt, HM, Liberatore, A, Ambretti, S, Pongolini, S, Soliani, L, Wille, A, Rojak, S, Hagen, RM, May, J, Pranada, AB & Kostrzewa, M 2022, 'Machine learning-based typing of Salmonella enterica O-serogroups by the Fourier-Transform Infrared (FTIR) Spectroscopy-based IR Biotyper system.', JOURNAL OF MICROBIOLOGICAL METHODS, vol. 201, pp. 106564. https://doi.org/10.1016/j.mimet.2022.106564

TY - JOUR

T1 - Machine learning-based typing of Salmonella enterica O-serogroups by the Fourier-Transform Infrared (FTIR) Spectroscopy-based IR Biotyper system.

AU - Cordovana, Miriam

AU - Mauder, Norman

AU - Join-Lambert, Olivier

AU - Gravey, François

AU - LeHello, Simon

AU - Auzou, Michel

AU - Pitti, Monica

AU - Zoppi, Simona

AU - Buhl, Michael

AU - Steinmann, Jörg

AU - Frickmann, Hagen

AU - Dekker, Denise

AU - Funashima, Yumiko

AU - Nagasawa, Zenzo

AU - Soki, József

AU - Orosz, László

AU - Veloo, Alida C

AU - Justesen, Ulrik S

AU - Holt, Hanne M

AU - Liberatore, Andrea

AU - Ambretti, Simone

AU - Pongolini, Stefano

AU - Soliani, Laura

AU - Wille, Andreas

AU - Rojak, Sandra

AU - Hagen, Ralf Matthias

AU - May, Jürgen

AU - Pranada, A B

AU - Kostrzewa, Markus

N1 - Buhl, Steinmann: Institute of Clinical Hygiene, Medical Microbiology and Infectiology, Paracelsus Medical University, Nuremberg, Germany

PY - 2022

Y1 - 2022

KW - DIFFERENTIATION

KW - IDENTIFICATION

KW - CLASSIFICATION

KW - BACTERIA

KW - SEROTYPE

U2 - 10.1016/j.mimet.2022.106564

DO - 10.1016/j.mimet.2022.106564

M3 - Original Article

C2 - 36084763

SN - 0167-7012

VL - 201

SP - 106564

JO - JOURNAL OF MICROBIOLOGICAL METHODS

JF - JOURNAL OF MICROBIOLOGICAL METHODS

ER -